Table 2 Overview of 104 putative lignin-modifying and hydrolytic lignocellulosic CAZymes and their gene expression profiles under 27 different cultivation conditions. The heat map visualises the transcriptional profiles of selected CAZyme-encoding genes involved in degradation of plant substrates. CAZY classes and families are shown in the first and second column, respectively (AA: Auxiliary Activities, GH: Glycosyl Hydrolase; CE: Carbohydrate Esterase). Predicted protein function and JGI IDs are listed in columns three and four, respectively. The heat map shows expression levels as log10 values of DESeq2 normalised raw counts with white = 0 and dark green = 10. (A) Gene expression heat map of 40 putative lignin-modifying enzymes. Expression levels of the newly identified transcription factors, calA and calB, as well as of the house keeping gene actin as a reference are depicted in the last three rows. (B) Gene expression heat map of 64 putative hydrolytic lignocellulosic enzymes and actin (bottom row)
